From: Javier Sancho Date: Tue, 13 Oct 2020 09:44:03 +0000 (+0200) Subject: Use dataset-connectors 2.0 api (wip) X-Git-Url: https://git.jsancho.org/?p=datasette-pytables.git;a=commitdiff_plain;h=0cd020af033fcb2a15fe3326f3a49830b816379c Use dataset-connectors 2.0 api (wip) --- diff --git a/datasette_pytables/__init__.py b/datasette_pytables/__init__.py index 5297982..396cd0d 100644 --- a/datasette_pytables/__init__.py +++ b/datasette_pytables/__init__.py @@ -1,8 +1,58 @@ from moz_sql_parser import parse import re + import tables +import datasette_connectors as dc + + +class PyTablesConnection(dc.Connection): + def __init__(self, path, connector): + super().__init__(path, connector) + self.h5file = tables.open_file(path) + + +class PyTablesConnector(dc.Connector): + connector_type = 'pytables' + connection_class = PyTablesConnection + + def table_names(self): + return [ + node._v_pathname + for node in self.conn.h5file + if not(isinstance(node, tables.group.Group)) + ] + + def table_count(self, table_name): + table = self.conn.h5file.get_node(table_name) + return int(table.nrows) + + def table_info(self, table_name): + table = self.conn.h5file.get_node(table_name) + colnames = ['value'] + if isinstance(table, tables.table.Table): + colnames = table.colnames + + return [ + { + 'idx': idx, + 'name': colname, + 'primary_key': False, + } + for idx, colname in enumerate(colnames) + ] + + def hidden_table_names(self): + return [] + + def detect_spatialite(self): + return False + + def view_names(self): + return [] + + def detect_fts(self, table_name): + return False -_connector_type = 'pytables' def inspect(path): "Open file and return tables info" @@ -31,7 +81,7 @@ def inspect(path): def _parse_sql(sql, params): # Table name - sql = re.sub('(?i)from \[(.*)]', 'from "\g<1>"', sql) + sql = re.sub(r'(?i)from \[(.*)]', r'from "\g<1>"', sql) # Params for param in params: sql = sql.replace(":" + param, param) @@ -43,7 +93,7 @@ def _parse_sql(sql, params): for token in ['group by', 'order by', 'limit', '']: res = re.search('(?i)where (.*)' + token, sql) if res: - modified_sql = re.sub('(?i)where (.*)(' + token + ')', '\g<2>', sql) + modified_sql = re.sub('(?i)where (.*)(' + token + ')', r'\g<2>', sql) parsed = parse(modified_sql) parsed['where'] = res.group(1).strip() break diff --git a/setup.py b/setup.py index 0e9f1f9..1fea91e 100644 --- a/setup.py +++ b/setup.py @@ -28,7 +28,7 @@ setup( ], }, install_requires=[ - 'datasette-connectors', + 'datasette-connectors>=2.0.0', 'tables', 'moz-sql-parser==1.3.18033', 'mo-future==1.6.18072' diff --git a/tests/fixtures.py b/tests/fixtures.py index 6093bda..4c12d55 100644 --- a/tests/fixtures.py +++ b/tests/fixtures.py @@ -1,28 +1,17 @@ from datasette_connectors import monkey; monkey.patch_datasette() -from datasette_connectors import connectors; connectors.load() +from datasette_connectors.connectors import ConnectorList +from datasette_pytables import PyTablesConnector +ConnectorList.add_connector('pytables', PyTablesConnector) from datasette.app import Datasette +from datasette.utils.testing import TestClient import numpy as np import os import pytest from tables import * import tempfile +import contextlib -@pytest.fixture(scope='session') -def app_client(max_returned_rows=None): - with tempfile.TemporaryDirectory() as tmpdir: - filepath = os.path.join(tmpdir, 'test_tables.h5') - populate_file(filepath) - ds = Datasette( - [filepath], - config={ - 'default_page_size': 50, - 'max_returned_rows': max_returned_rows or 1000, - } - ) - client = ds.app().test_client - client.ds = ds - yield client def populate_file(filepath): class Particle(IsDescription): @@ -57,3 +46,45 @@ def populate_file(filepath): table.flush() h5file.close() + + +@contextlib.contextmanager +def make_app_client( + max_returned_rows=None, + config=None, + is_immutable=False, +): + with tempfile.TemporaryDirectory() as tmpdir: + filepath = os.path.join(tmpdir, 'test_tables.h5') + populate_file(filepath) + if is_immutable: + files = [] + immutables = [filepath] + else: + files = [filepath] + immutables = [] + config = config or {} + config.update({ + 'default_page_size': 50, + 'max_returned_rows': max_returned_rows or 1000, + }) + ds = Datasette( + files, + immutables=immutables, + config=config, + ) + client = TestClient(ds.app()) + client.ds = ds + yield client + + +@pytest.fixture(scope='session') +def app_client(): + with make_app_client() as client: + yield client + + +@pytest.fixture(scope='session') +def app_client_with_hash(): + with make_app_client(config={"hash_urls": True}, is_immutable=True) as client: + yield client diff --git a/tests/test_api.py b/tests/test_api.py index db9e41c..9d50932 100644 --- a/tests/test_api.py +++ b/tests/test_api.py @@ -3,7 +3,7 @@ import pytest from urllib.parse import urlencode def test_homepage(app_client): - _, response = app_client.get('/.json') + response = app_client.get('/.json') assert response.status == 200 assert response.json.keys() == {'test_tables': 0}.keys() d = response.json['test_tables']