X-Git-Url: https://git.jsancho.org/?p=datasette-pytables.git;a=blobdiff_plain;f=datasette_pytables%2F__init__.py;h=80349a6f918cb5eb58728785bca258a69a42a9ce;hp=5e37c45d451c21bd8711baafa4ace4c9380af5bb;hb=7574220c89f66e62f93aed8fbe12e45e0db27f46;hpb=8902befd7c83af84e9f68d7abea19edc6b14dca4 diff --git a/datasette_pytables/__init__.py b/datasette_pytables/__init__.py index 5e37c45..80349a6 100644 --- a/datasette_pytables/__init__.py +++ b/datasette_pytables/__init__.py @@ -1,6 +1,6 @@ +from moz_sql_parser import parse +import re import tables -import sqlparse -from collections import OrderedDict _connector_type = 'pytables' @@ -19,7 +19,7 @@ def inspect(path): 'name': table._v_pathname, 'columns': colnames, 'primary_keys': [], - 'count': table.nrows, + 'count': int(table.nrows), 'label_column': None, 'hidden': False, 'fts_table': None, @@ -29,82 +29,249 @@ def inspect(path): h5file.close() return h5tables, views, _connector_type -def _parse_sql(sql): - parsed = sqlparse.parse(sql) - stmt = parsed[0] - parsed_sql = {} - current_keyword = "" - for token in stmt.tokens: - if token.is_keyword: - if current_keyword in parsed_sql and parsed_sql[current_keyword] == '': - # Check composed keywords like 'order by' - del parsed_sql[current_keyword] - current_keyword += " " + str(token) - else: - current_keyword = str(token) - parsed_sql[current_keyword] = "" - else: - if not token.is_whitespace: - parsed_sql[current_keyword] += str(token) - return parsed_sql +def _parse_sql(sql, params): + # Table name + sql = re.sub('(?i)from \[(.*)]', 'from "\g<1>"', sql) + # Params + for param in params: + sql = sql.replace(":" + param, param) + + try: + parsed = parse(sql) + except: + # Propably it's a PyTables expression + for token in ['group by', 'order by', 'limit', '']: + res = re.search('(?i)where (.*)' + token, sql) + if res: + modified_sql = re.sub('(?i)where (.*)(' + token + ')', '\g<2>', sql) + parsed = parse(modified_sql) + parsed['where'] = res.group(1).strip() + break + + # Always a list of fields + if type(parsed['select']) is not list: + parsed['select'] = [parsed['select']] + + return parsed + +_operators = { + 'eq': '==', + 'neq': '!=', + 'gt': '>', + 'gte': '>=', + 'lt': '<', + 'lte': '<=', + 'and': '&', + 'or': '|', +} class Connection: def __init__(self, path): self.path = path self.h5file = tables.open_file(path) - def execute(self, sql, params=None, truncate=False): + def execute(self, sql, params=None, truncate=False, page_size=None, max_returned_rows=None): + if params is None: + params = {} rows = [] truncated = False description = [] - parsed_sql = _parse_sql(sql) - table = self.h5file.get_node(parsed_sql['from'][1:-1]) + parsed_sql = _parse_sql(sql, params) + + if parsed_sql['from'] == 'sqlite_master': + rows = self._execute_datasette_query(sql, params) + description = (('value',)) + return rows, truncated, description + + table = self.h5file.get_node(parsed_sql['from']) table_rows = [] - fields = parsed_sql['select'].split(',') + fields = parsed_sql['select'] + + query = '' + start = 0 + end = table.nrows # Use 'where' statement or get all the rows + def _cast_param(field, pname): + # Cast value to the column type + if type(table) is tables.table.Table: + coltype = table.coltypes[field] + else: + coltype = table.dtype.name + fcast = None + if coltype == 'string': + fcast = str + elif coltype.startswith('int'): + fcast = int + elif coltype.startswith('float'): + fcast = float + if fcast: + params[pname] = fcast(params[pname]) + + def _translate_where(where): + # Translate SQL to PyTables expression + nonlocal start, end + expr = '' + operator = list(where)[0] + + if operator in ['and', 'or']: + subexpr = [_translate_where(e) for e in where[operator]] + subexpr = filter(lambda e: e, subexpr) + subexpr = ["({})".format(e) for e in subexpr] + expr = " {} ".format(_operators[operator]).join(subexpr) + elif operator == 'exists': + pass + elif where == {'eq': ['rowid', 'p0']}: + start = int(params['p0']) + end = start + 1 + elif where == {'gt': ['rowid', 'p0']}: + start = int(params['p0']) + 1 + else: + left, right = where[operator] + if left in params: + _cast_param(right, left) + elif right in params: + _cast_param(left, right) + + expr = "{left} {operator} {right}".format(left=left, operator=_operators.get(operator, operator), right=right) + + return expr + if 'where' in parsed_sql: - pass + if type(parsed_sql['where']) is dict: + query = _translate_where(parsed_sql['where']) + else: + query = parsed_sql['where'] + + # Limit number of rows + limit = None + if 'limit' in parsed_sql: + limit = int(parsed_sql['limit']) + + # Truncate if needed + if page_size and max_returned_rows and truncate: + if max_returned_rows == page_size: + max_returned_rows += 1 + + # Execute query + if query: + table_rows = table.where(query, params, start, end) else: - table_rows = table.iterrows() + table_rows = table.iterrows(start, end) # Prepare rows - if len(fields) == 1 and fields[0] == 'count(*)': - rows.append(Row({fields[0]: table.nrows})) + if len(fields) == 1 and type(fields[0]['value']) is dict and \ + fields[0]['value'].get('count') == '*': + rows.append(Row({'count(*)': int(table.nrows)})) else: - for table_row in table_rows: - row = Row() - for field in fields: - if field == 'rowid': - row[field] = table_row.nrow - elif field == '*': - for col in table.colnames: - value = table_row[col] + if type(table) is tables.table.Table: + count = 0 + for table_row in table_rows: + count += 1 + if limit and count > limit: + break + if truncate and max_returned_rows and count > max_returned_rows: + truncated = True + break + row = Row() + for field in fields: + field_name = field['value'] + if type(field_name) is dict and 'distinct' in field_name: + field_name = field_name['distinct'] + if field_name == 'rowid': + row['rowid'] = int(table_row.nrow) + elif field_name == '*': + for col in table.colnames: + value = table_row[col] + if type(value) is bytes: + value = value.decode('utf-8') + row[col] = value + else: + row[field_name] = table_row[field_name] + rows.append(row) + else: + # Any kind of array + rowid = start - 1 + count = 0 + for table_row in table_rows: + count += 1 + if limit and count > limit: + break + if truncate and max_returned_rows and count > max_returned_rows: + truncated = True + break + row = Row() + rowid += 1 + for field in fields: + field_name = field['value'] + if type(field_name) is dict and 'distinct' in field_name: + field_name = field_name['distinct'] + if field_name == 'rowid': + row['rowid'] = rowid + else: + value = table_row if type(value) is bytes: value = value.decode('utf-8') - row[col] = value - else: - row[field] = table_row[field] - rows.append(row) + elif not type(value) in (int, float, complex): + value = str(value) + row['value'] = value + rows.append(row) # Prepare query description - for field in fields: + for field in [f['value'] for f in fields]: if field == '*': - for col in table.colnames: - description.append((col,)) + if type(table) is tables.table.Table: + for col in table.colnames: + description.append((col,)) + else: + description.append(('value',)) else: description.append((field,)) - if truncate: - return rows, truncated, tuple(description) + # Return the rows + return rows, truncated, tuple(description) + + def _execute_datasette_query(self, sql, params): + "Datasette special queries for getting tables info" + if sql == "SELECT count(*) from sqlite_master WHERE type = 'view' and name=:n": + row = Row() + row['count(*)'] = 0 + return [row] + elif sql == 'select sql from sqlite_master where name = :n and type="table"': + try: + table = self.h5file.get_node(params['n']) + row = Row() + row['sql'] = 'CREATE TABLE {} ()'.format(params['n']) + return [row] + except: + return [] else: - return rows + raise Exception("SQLite queries cannot be executed with this connector") -class Row(OrderedDict): - def __getitem__(self, label): - if type(label) is int: - return super(OrderedDict, self).__getitem__(list(self.keys())[label]) +class Row(list): + def __init__(self, values=None): + self.labels = [] + self.values = [] + if values: + for idx in values: + self.__setitem__(idx, values[idx]) + + def __setitem__(self, idx, value): + if type(idx) is str: + if idx in self.labels: + self.values[self.labels.index(idx)] = value + else: + self.labels.append(idx) + self.values.append(value) + else: + self.values[idx] = value + + def __getitem__(self, idx): + if type(idx) is str: + return self.values[self.labels.index(idx)] + else: + return self.values[idx] def __iter__(self): - return self.values().__iter__() + return self.values.__iter__()